ライフサイエンスコーパス: Paracoccus

1 wever, in species of Pseudomonas, Rhizobium, Paracoccus and Legionella, mutations in ccm genes result

2 cloned vbs genes, plus rpoI, to Rhodobacter, Paracoccus and Sinorhizobium conferred the ability to ma

3 None of the Paracoccus control strains hybridized at >54% with any o

4 state of cytochrome c550 for its binding to Paracoccus cytochrome c peroxidase and its delivery of t

5 icans can accommodate horse cytochrome c and Paracoccus cytochrome c(550) at different sites on its m

6 pH 6.0, I = 0.026) but only one molecule of Paracoccus cytochrome c-550 with a K(d) of 2.8 microM, m

7 For both horse cytochrome c and Paracoccus cytochrome c-550, the binding is endothermic

8 on (PDB code 1occ) and of the soil bacterium Paracoccus denitrificans (1arl) include a dicopper cente

9 The enzyme from Paracoccus denitrificans (NorBC) contains two subunits;

10 igands to the native type I copper center of Paracoccus denitrificans amicyanin was replaced with the

11 g with antibodies raised against subunits of Paracoccus denitrificans and against synthetic peptides

12 l structures of the cytochrome oxidases from Paracoccus denitrificans and bovine.

13 Cytochrome aa3 from Paracoccus denitrificans and cytochrome ba3 from Thermus

14 between the cytochrome c peroxidase (CCP) of Paracoccus denitrificans and cytochromes c.

15 This is similar to COX from Paracoccus denitrificans and is in contrast to the bovin

16 acter sphaeroides is specifically related to Paracoccus denitrificans and Rc. gelatinosa is related t

17 t is a novel inhibitor of the F1FO-ATPase of Paracoccus denitrificans and related alpha-proteobacteri

18 lly simpler bacterial counterpart (NDH-1) in Paracoccus denitrificans and Thermus thermophilus HB-8 c

19 Control strains were Paracoccus denitrificans ATCC 17741(T), P. versutus ATCC

20 in the dimeric cytochrome bc(1) complex from Paracoccus denitrificans by characterizing the kinetics

21 previous papers, cytochrome c peroxidase of Paracoccus denitrificans can accommodate horse cytochrom

22 Cloning and sequencing of the Paracoccus denitrificans ccmG gene indicates that it cod

23 The NADH-quinone oxidoreductase from Paracoccus denitrificans consists of 14 subunits (Nqo1-1

24 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans consists of at least 14 unlike

25 Paracoccus denitrificans contains an unusual arrangement

26 chemical changes in the P(M) intermediate of Paracoccus denitrificans cytochrome c oxidase have been

27 The structure of the P(M) intermediate of Paracoccus denitrificans cytochrome c oxidase was invest

28 es of P(M) and F intermediates of bovine and Paracoccus denitrificans cytochrome c oxidase were inves

29 Paracoccus denitrificans cytochrome C550 is expressed as

30 Paracoccus denitrificans ETF has the identical function,

31 he three-dimensional structures of human and Paracoccus denitrificans ETFs determined by X-ray crysta

32 Our work with the model denitrifying strain Paracoccus denitrificans further shows that ligand-enhan

33 ic quinohemoprotein amine dehydrogenase from Paracoccus denitrificans has been determined at 2.05-A r

34 quinoprotein methylamine dehydrogenase from Paracoccus denitrificans has been refined at 1.75 A reso

35 ccinate:ubiquinone oxidoreductase (SQR) from Paracoccus denitrificans have been undertaken in the pur

36 residue in both Saccharomyces cerevisiae and Paracoccus denitrificans have indicated that mutations a

37 of these ligands in supporting the growth of Paracoccus denitrificans in a low-iron environment and t

38 he zinc-specific SBP AztC from the bacterium Paracoccus denitrificans in the zinc-bound and apo-state

39 Amicyanin from Paracoccus denitrificans is a type 1 copper protein with

40 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of 14 different sub

41 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of 14 different sub

42 e- (NADH-) quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of at least 14 diff

43 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of at least 14 subu

44 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of at least 14 unli

45 We demonstrate that NarK from Paracoccus denitrificans is expressed as a fusion of two

46 esidues (Trp(beta)(57) and Trp(beta)(108) in Paracoccus denitrificans MADH).

47 Paracoccus denitrificans methylamine dehydrogenase (MADH

48 We demonstrated that in the Paracoccus denitrificans NDH-1 subunit, Nqo7 (ND3) direc

49 1-14, encode subunits homologous to those of Paracoccus denitrificans NDH-1, respectively, and are ar

50 Molecular properties of the NQO9 subunit of Paracoccus denitrificans NDH-1, which is predicted to co

51 reported for the homologous D477A mutant of Paracoccus denitrificans or for bovine COX (K(d) = 1-3 m

52 dicted from the known processing site of the Paracoccus denitrificans oxidase, does not produce the s

53 ification inhibition in a model denitrifier, Paracoccus denitrificans Pd1222.

54 esolution structure of the related MADH from Paracoccus denitrificans recently reported.

55 The NO reductase from Paracoccus denitrificans reduces NO to N2O (2NO + 2H(+)

56 sis of methylamine dehydrogenase (MADH) from Paracoccus denitrificans requires four genes in addition

57 sis of methylamine dehydrogenase (MADH) from Paracoccus denitrificans requires four genes in addition

58 alculations on the cytochrome c oxidase from Paracoccus denitrificans revealed an unexpected coupling

59 he amino acid sequence of cytochrome c550 of Paracoccus denitrificans strain LMD 52.44 was determined

60 The three-dimensional fold of Paracoccus denitrificans TIR is identical to that observ

61 Threonine 244 in the alpha subunit of Paracoccus denitrificans transfer flavoprotein (ETF) lie

62 based on the biological reduction of N2O by Paracoccus denitrificans using methanol as a carbon/elec

63 of electron transfer flavoprotein (ETF) from Paracoccus denitrificans was determined and refined to a

64 of the Type I copper protein, amicyanin from Paracoccus denitrificans was determined at 1.8 A resolut

65 rystal structure of a new cluster 9 SBP from Paracoccus denitrificans we have called AztC.

66 Human and Paracoccus denitrificans wild-type electron transfer fla

67 of the type I copper protein amicyanin from Paracoccus denitrificans with cobalt.

68 Expression in Paracoccus denitrificans yielded no holoprotein.

69 unction, as revealed by the structure of the Paracoccus denitrificans zeta-subunit in complex with AD

70 oxidases, the equivalent tryptophan (W121 in Paracoccus denitrificans) has been identified as the "el

71 y dependent on haem-iron as a cofactor (e.g. Paracoccus denitrificans) or a Nir that is solely depend

72 ms from methane-acclimated sludge (including Paracoccus denitrificans) to facilitate electron transfe

73 ry oxidases from Rhodobacter sphaeroides and Paracoccus denitrificans).

74 t mitochondria, Rhodobacter sphaeroides, and Paracoccus denitrificans).

75 with structures of Rhodobacter sphaeroides, Paracoccus denitrificans, and bovine CcO derived by crys

76 ic to a bacterium related to R. sphaeroides, Paracoccus denitrificans, and is lethal to R. sphaeroide

77 Atp11p from Candida glabrata and Atp12p from Paracoccus denitrificans, and we show that some features

78 ATP synthase from the alpha-proteobacterium Paracoccus denitrificans, inhibited by its natural regul

79 dditionally conserved in Pichia pastoris and Paracoccus denitrificans, suggesting that they are funct

80 In Paracoccus denitrificans, the pathway-specific two-compo

81 f this putative accessory factor (AztD) from Paracoccus denitrificans, we have analyzed its transcrip

82 ria (from Bos taurus) and from the bacterium Paracoccus denitrificans, we show that four protons are

83 , also observed in cytochrome c oxidase from Paracoccus denitrificans, were similarly associated with

84 species, such as Rhodobacter sphaeroides and Paracoccus denitrificans, which contain an additional mi

85 ing NADH-quinone oxidoreductase (NDH-1) from Paracoccus denitrificans, which is composed of the NQO1

86 the CuA sites in COX of bovine heart and of Paracoccus denitrificans.

87 uA center in cytochrome c oxidase (COX) from Paracoccus denitrificans.

88 o those of the native CuA center in COX from Paracoccus denitrificans.

89 this process has been studied extensively in Paracoccus denitrificans.

90 nters of nitrous oxide reductase (N2OR) from Paracoccus denitrificans.

91 Parabactin was extracted from cultures of Paracoccus denitrificans.

92 ytochromes to the cytochrome c peroxidase of Paracoccus denitrificans.

93 one production by Rhodobacter capsulatus and Paracoccus denitrificans.

94 ration during hypoxia, as does the bacterium Paracoccus denitrificans.

95 ion from previous work with the oxidase from Paracoccus denitrificans.

96 anada to determine their relationship to the Paracoccus genus.

97 y reacted with a single band (11 kDa) of the Paracoccus membranes and cross-reacted with Rhodobactor

98 ubunit was not able to be extracted from the Paracoccus membranes by NaI or alkaline treatment, unlik

99 qo10 subunit could not be extracted from the Paracoccus membranes by NaI or alkaline treatment, which

100 thylamino)propyl]carbodiimide (EDC), and the Paracoccus membranes were used, and the cross-linked pro

101 results were the same as those obtained with Paracoccus membranes.

102 with that of the Nqo10 subunit in the native Paracoccus membranes.

103 t reacted with a single band (15 kDa) of the Paracoccus membranes.

104 sistent with that of the NQO7 subunit in the Paracoccus membranes.

105 in SY is phylogenetically closely related to Paracoccus niistensis with a 16S rRNA gene similarity of

106 The C-terminal region of the Paracoccus Nqo11 is exposed to the cytoplasmic phase.

107 the C-terminal 12 amino acid residues of the Paracoccus Nqo11 subunit (Nqo11c) has been raised.

108 In this report, the characterization of the Paracoccus Nqo11 subunit has been investigated.

109 For further characterization of the Paracoccus Nqo11 subunit, the subunit was overexpressed

110 The data suggest that the Paracoccus NQO7 subunit contains three transmembrane seg

111 modification techniques, the topology of the Paracoccus NQO7 subunit in the membranes has been examin

112 the soil were closely related to the genera Paracoccus of alpha-Proteobacteria.

113 Paracoccus pantotrophus can express a periplasmic nitrat

114 ratory reduction of nitrate to dinitrogen in Paracoccus pantotrophus is catalyzed by the quinol-nitra

115 erize a sirohydrochlorin-ferrochelatase from Paracoccus pantotrophus that catalyses the last step of

116 embrane-bound nitrate reductase (narGHJI) in Paracoccus pantotrophus there is a fusion of two genes,

117 single site on cytochrome c peroxidase from Paracoccus pantotrophus with a K(d) of 16.4 microM at 25

118 from a variety of proteobacteria, especially Paracoccus pantotrophus.

119 laced the EO-2 cluster in close proximity to Paracoccus species (95 to 97% similarity).

120 ide direct evidence for As(III) oxidation by Paracoccus species and suggest that these species may pl

121 results indicate that EO-2 represents a new Paracoccus species, the first isolated from human clinic

122 ars to be distinct from but related to other Paracoccus species.

123 Furthermore, Paracoccus subunits Nqo3, Nqo6, and Nqo7 were heterologo

124 metal in P. denitrificans amicyanin than in Paracoccus versutus amicyanin.

125 m the P. laminosum plastocyanin gene and the Paracoccus versutus cytochrome c-550 gene), much higher

126 A new species, Paracoccus yeeii, is proposed for the EO-2 strains.

127 ltage-dependent Na(+) channels (Na(V)PZ from Paracoccus zeaxanthinifaciens and Na(V)SP from Silicibac