ライフサイエンスコーパス: be sequenced

1 omidae, and the first Antarctic eukaryote to be sequenced.

2 l genomes of the individual being studied to be sequenced.

3 that have evaded cultivation and have yet to be sequenced.

4 eased when tumor samples from multiple sites are sequenced.

5 ts] and biopsies [160 mg/day and expansion]) was sequenced.

6 A from both simulated FNAs and clinical FNAs was sequenced.

7 The gene CYP4V2 was sequenced.

8 enes, and the depth at which each transcript was sequenced.

9 periments, and the biosynthesis gene cluster was sequenced.

10 ubisco activase (RCA) gene from each species was sequenced.

11 array of strains from different sources have been sequenced.

12 technologies, many genomes of Yersinia have been sequenced.

13 The genomes of two woolly mammoths have been sequenced.

14 of SelenoDB 1.0 many new animal genomes have been sequenced.

15 A large number of bacteriophage genomes have been sequenced.

16 the axolotl, a species whose genome has not been sequenced.

17 , and a large number of E. coli strains have been sequenced.

18 iruses isolated on marine cyanobacteria have been sequenced.

19 ncreasing number of non-model organisms have been sequenced.

20 NA from samples enriched for virus particles were sequenced.

21 lciparum samples collected from 12 countries were sequenced.

22 D8 isolates from outside the epidemic period were sequenced.

23 t that failed antibacterial therapy and died were sequenced.

24 al and environmental S. Enteritidis isolates were sequenced.

25 type, and two RRV isolates, 26-95 and 17577, were sequenced.

26 CR amplified for Pfhrp2 and Pfhrp3 genes and were sequenced.

27 and all poliovirus isolates after the switch were sequenced.

28 Coding regions of the CHM gene were sequenced.

29 erum samples, and the 5' UTR and NS5B region were sequenced.

30 chromosome 8; all genes within this interval were sequenced.

31 ent developmental stages of different organs were sequenced.

32 Coding regions of the CLRN1 gene were sequenced.

33 h a positive initial screen for C. difficile were sequenced.

34 four affected and two unaffected individuals were sequenced.

35 locations, and 1854 patients; 1819 isolates were sequenced.

36 from neuronal DNA, and neuronal L1 libraries were sequenced.

37 7 unilateral affected cases and 14 controls were sequenced.

38 racterised physiologically and their genomes were sequenced.

39 nomes of 90 individuals across nine families were sequenced.

40 in different fractions of the transcriptome being sequenced.

41 eply should the ChIP and the control samples be sequenced?

42 isolated from a single individual, which has been sequenced 10 times.

43 Each sample was sequenced (16S SSU rRNA genes, average 10,000 reads)

44 The first stored isolate from each case was sequenced (200 VREfm [197 vanA, 2 vanB, and 1 isolat

45 A total of 41 tumor samples were sequenced (33 adenocarcinomas [ADs] and eight squam

46 Of 213 true-positive samples that were sequenced, 36.2% showed point mutations associated

47 Two of these DNAs were sequenced after Phi29 polymerase amplification, and

48 A subset of 297 E. coli strains were sequenced allowing in silico analyses of phylo- and

49 in the United Kingdom, France, and Tunisia, were sequenced along with the type strain.

50 enomes of R. multicaudata and Trypanobia sp. are sequenced and analysed, representing the first ones

51 d genotype imputation in which some subjects are sequenced and missing genotypes are inferred on the

52 agnetite biomineralization, as their genomes are sequenced and tools are available for their genetic

53 yclinone (sim) biosynthetic gene cluster has been sequenced and a hypothetical biosynthetic pathway h

54 For organisms whose genomes have not been sequenced and annotated, transcriptomes must be ass

55 plant pathogens that have genomes that have been sequenced and annotated.

56 Hundreds of vertebrate genomes have been sequenced and assembled to date.

57 han other monocotyledonous species that have been sequenced and comprises aquatic plants that grow ra

58 ting hosts in the phylum Actinobacteria have been sequenced and grouped into Cluster A because of the

59 high-copy-number sequences in the libraries being sequenced and analyzed, particularly when applied

60 The env gp41 region was sequenced and characterized for 172 HIV-positive spe

61 n cob found in the Tehuacan Valley in Mexico was sequenced and compared to modern maize and its wild

62 levels of HDL cholesterol and Lp(a), SCARB1 was sequenced and demonstrated a missense mutation resul

63 First, the C. brunneus transcriptome was sequenced and RNAi functionality was confirmed by su

64 usca single nucleopolyhedrovirus (PeluSNPV), was sequenced and shown to contain 132,831 bp with 145 p

65 The detected PRSV coat protein PCR product was sequenced and the nucleotide sequence showed identit

66 The bacterial producer of deimino-antipain was sequenced and the responsible biosynthetic gene clus

67 The amplified products were sequenced and analyzed by phylogenetic analyses.

68 of segregating thermotolerant (mutant) seeds were sequenced and analyzed for homozygous single-nucleo

69 solates (n = 297) from multiple host species were sequenced and analyzed for patterns of gene dispers

70 tment were analyzed; 16S ribosomal RNA genes were sequenced and analyzed from each sample.

71 ice site boundaries of the three RAD51 genes were sequenced and analyzed in germline DNA from a case-

72 osome (HSY) and its X chromosome counterpart were sequenced and analyzed previously.

73 provinces of mainland China during 2010-2012 were sequenced and analyzed, significantly extending pre

74 91 mitogenomes from 32 different species were sequenced and assembled with high fidelity, using a

75 d from freshwater watersheds (environmental) were sequenced and compared to 59 available enteric geno

76 Genomes were sequenced and compared to known strains, mostly col

77 egrading and nondegrading BIOMIG1 phenotypes were sequenced and differentially compared with each oth

78 and the D2 region of 28S ribosomal RNA gene were sequenced and fungi identified.

79 isolates from mild, severe, and fatal cases were sequenced and highly similar with each other.

80 Peptides extracted from biopsy specimens were sequenced and quantified using label-free mass spec

81 ng antibodies (clones 2.43 and YTS169.4.2.1) were sequenced and reformatted into minibody (Mb) fragme

82 oradic cases collected between 2001 and 2012 were sequenced and subjected to subtyping by four differ

83 enomes of the three producing Pseudonocardia were sequenced and the biosynthetic gene clusters identi

84 ing beta-giardin and glutamate dehydrogenase were sequenced and their alignment were carried out with

85 In this study, an additional 176 specimens were sequenced and used to characterize the population s

86 The monarch genome has been sequenced, and genetic strategies using nuclease-ba

87 e representing each of the CMS cytotypes has been sequenced, and male sterility in the cms-S and cms-

88 ical backgrounds of the individuals who have been sequenced, and the computing environment used.

89 New microbial genomes are constantly being sequenced, and it is crucial to accurately determi

90 The FASLG gene was sequenced, and its expression was analyzed by means

91 The M12X01451 stx1 was sequenced, and the holotoxin was found to share only

92 from selected experimentally infected birds was sequenced, and three amino acid differences were com

93 Twenty-five chloroplast genomes were sequenced, and 1127 plant accessions were genotyped

94 20 amplicons of the cagA 3' variable region were sequenced, and analyzed in silico, and the amino ac

95 Candidate genes were sequenced, and mtDNA was analyzed for rearrangement

96 501 unrelated Staphylococcus aureus isolates were sequenced, and the assembled genomes were interroga

97 SPINK5 mutations were sequenced, and thorough clinical evaluation and his

98 The genomes of giraffe and okapi were sequenced, and through comparative analyses genes a

99 ber of bacterial artificial chromosome (BAC) were sequenced, annotated and the presence of repetitive

100 tment (SBT) causes unmethylated cytosines to be sequenced as thymine, which allows methylation levels

101 and 26 blood donors; the remaining HUE cases were sequenced as a pool.

102 We present 1,003 reference genomes that were sequenced as part of the Genomic Encyclopedia of Ba

103 se a novel method that assumes study samples are sequenced at low coverage and genotyped on a genome-

104 ing hundreds of millions of DNA molecules to be sequenced at a time.

105 entire cancer genome or parts of it can now be sequenced at speed with increased depth and sensitivi

106 orward tasks on a single individual that has been sequenced at high coverage, because the inference d

107 ng and genotyping of large cohorts that have been sequenced at low coverage.

108 Genomes of emerging model organisms are now being sequenced at very low cost.

109 The first mammoth was sequenced at 17.1-fold coverage and dates to approxi

110 higher number of H5N1 genes than H5N8 genes was sequenced at 3 and 7 dpi, which is consistent with h

111 Most of the pathogens detected were sequenced at sufficient breadth and depth to confid

112 ntire Tst locus along with flanking segments was sequenced between our unique polygenic mouse Fat and

113 salivary and cutaneous cancers, whose tumors were sequenced between January 2014 and July 2015 at Mem

114 salivary and cutaneous cancers, whose tumors were sequenced between January 2014 and July 2015 at Mem

115 A number of apicomplexan genomes have been sequenced, but the accurate annotation of gene func

116 The generated amplicons could be sequenced by different methods, such as population Sa

117 using small amounts of input RNA that cannot be sequenced by standard methods.

118 Ideally, such genomes would be sequenced by two different methods so that one assemb

119 arrangements for the large number of genomes being sequenced by NGS that do not have a genetic or phy

120 Each enzyme was sequenced by mass spectometery (deconvoluted with an

121 The full viral genome was sequenced by primer walking.

122 A panel of 116 SNPs was sequenced by using the Sequenom iPLEX Gold platform

123 ostats, and artificial microbial communities were sequenced by 15 laboratories and analyzed using nin

124 y-two clones corresponding to 22 FPC contigs were sequenced by Illumina MiSeq technology.

125 The amplicons were sequenced by Roche 454, the genomes assembled by de

126 ter (or in 1 case, 62 weeks after) infection were sequenced by single-molecule, real-time technology,

127 Complementary DNA libraries were sequenced by Solexa.

128 d to partial trypsin digestion, and peptides were sequenced by tandem mass spectrometry.

129 re than 1,400 mycobacteriophage genomes have been sequenced, coding for over one hundred thousand pro

130 The number of human genomes that have been sequenced completely for different individuals has

131 fraction of the cohort where the ABCA4 gene was sequenced completely, the detection rates reached 73

132 d that 84% of an individual human genome can be sequenced confidently.

133 past decade, thousands of human genomes have been sequenced, contributing deeply to biomedical resear

134 he confidence measurement that each base has been sequenced correctly.

135 ately 2x10(6) cDNA clones from each genotype were sequenced, corresponding to 33 274 independent tran

136 Now, its genome has been sequenced, enabling renewed experimental study and

137 first clinical isolate of S. maltophilia to be sequenced, encodes a functional type II protein secre

138 e efficient, allowing whole human genomes to be sequenced faster and cheaper than ever before.

139 ficial chromosome (BACs) in the physical map were sequenced, fine structure was limited.

140 een isolates from six suspected XDR-TB cases were sequenced; five cases were analyzed in a clinically

141 gically characterized infectious P-MLVs have been sequenced for comparative analysis.

142 Genomic DNA from all 1007 NYBCS probands was sequenced for 23 known and candidate breast cancer g

143 The staphylococcal protein A (spa) gene was sequenced for all isolates to determine a spa type.

144 reast Cancer Study (NYBCS) from 1996 to 2000 was sequenced for known and candidate breast cancer gene

145 Tumor DNA was sequenced for MLH1, MSH2, MSH6, PMS2, EPCAM, POLE, a

146 Bone marrow DNA was sequenced for mutations in 22 frequently mutated mye

147 -epithelium swabs (matched control subjects) was sequenced for the V1-V3 region using Illumina's 2 x

148 l known pathogenic variants in other regions were sequenced for 42 genes that had cancer risk associa

149 Amplicons of RT-PCR positive cases were sequenced for characterisation of strains.

150 ttsii, the genomes of two additional strains were sequenced for comparison to known sequences (compar

151 lium samples from cases failing moxifloxacin were sequenced for fluoroquinolone resistance mutations.

152 was genotyped, and mutation-negative samples were sequenced for HCM genes and other hypertrophic gene

153 Ninety-six phage clones were sequenced for identification, and 21 clones were va

154 rt of 744 primary CRCs and 36 CRC cell lines were sequenced for SMAD4, SMAD2, and SMAD3 and analyzed

155 subtypes) and 809 European ancestry controls were sequenced; for replication, 47 affected sibpairs co

156 used to prepare sequencing libraries, which are sequenced from the 3' end to provide high-resolution

157 corporates the characteristics of reads that are sequenced from the domain regions and assembles them

158 chimeric transcripts from read data that has been sequenced from sources containing isoform complexit

159 nd the first time that multiple genomes have been sequenced from sub-Saharan Africa, a geographic are

160 The 479 Mb medfly genome is sequenced from adult flies from lines inbred for 20 g

161 nitially, a 2,800-bp E5a-E5b-L1-LCR fragment was sequenced from 492/530 (92.8%) HPV6-positive samples

162 RNA was sequenced from 9 pollens, and the reads were assembl

163 platform was applied and the transcribed RNA was sequenced from a collection of different lily and tu

164 The DEPDC5 gene was sequenced from genomic blood and brain DNA.

165 RNA was sequenced from seven different stages of seed develo

166 study, the genome of Elaphomyces granulatus was sequenced from sporocarp tissue.

167 Germline DNA was sequenced from women with OC using a targeted captur

168 test this hypothesis, microbial metagenomes were sequenced from 22 coral reefs at 11 Line Islands in

169 Muscle microRNAs and mRNAs were sequenced from 22 families showing divergent phenot

170 Fifteen soybean small RNA libraries were sequenced from different stages of nodule developme

171 progression, two genomes (normal and tumor) were sequenced from each of five stomach cancer patients

172 Though its genome has been sequenced, functional characterization of many Ae.

173 h butterfly (Danaus plexippus), whose genome is sequenced, has emerged as a model to study animal clo

174 all viral nucleic acids present in a sample are sequenced in a random, shotgun manner.

175 erts are of a variety of lengths and samples are sequenced in separate batches.

176 lows that require fractions of the genome to be sequenced in a large number of compartments.

177 Microbial genomes can now be sequenced in a matter of hours, which has led to a si

178 ity maturation." The resulting receptors can be sequenced in high throughput for research and diagnos

179 The ANO10 gene has been sequenced in 186 consecutive patients with ARCA.

180 has led to thousands of human genomes having been sequenced in the past years.

181 ALPP was sequenced in 100 controls and 100 patients affected

182 The entire 140 kb ABCA4 genomic locus was sequenced in 114 STGD patients with one known ABCA4

183 lanesians the coding region of the MC1R gene was sequenced in 188 individuals from Northern Island Me

184 In this genetic study, ADRB2 was sequenced in 197 African American, 191 non-Hispanic

185 SCN10A was sequenced in 225 AF patients in whom there was no ev

186 A chromosome 6 locus (7,370,061-7,606,946) was sequenced in 230 subjects with IPF and 228 control s

187 STAT1 was sequenced in 3 patients with PML.

188 Here, SIM1 was sequenced in 44 children with Prader-Willi-like synd

189 PROS1 was sequenced in 48 subjects with free protein S level <

190 ROCK1 was sequenced in a discovery cohort of 93 non-syndromic

191 IFITM3 was sequenced in patients and parents were genotyped for

192 STAT1 was sequenced in probands and available relatives.

193 ied in other B-cell malignancies, 1716 genes were sequenced in 113 FL tumor samples from 105 primaril

194 Large pools of selected insertion sites were sequenced in a high throughput manner using Tn-seq

195 FBN1 and a related gene, fibrillin-2 (FBN2), were sequenced in a total of 852 AIS cases and 669 contr

196 tia, and related neurodegenerative syndromes were sequenced in Chamorro subjects living in the Marian

197 region, exon-intron junctions of four genes were sequenced in DNA from 39 Saudi VKH patients and 50

198 id change in the E5a-E5b-L1-LCR fragment and were sequenced in full.

199 terized orthotopic xenografts of tumors that were sequenced in our study.

200 Candidate genes and whole exomes were sequenced in relapse tumor biopsies to search for m

201 [NSCLC], colorectal carcinoma, and melanoma) were sequenced in the context of the UK National Health

202 Thirty unique non-host RNAs were sequenced in the cultivated fungus, Agaricus bispor

203 t LD-causing Legionella species (of which 33 were sequenced in this study) in addition to 10 publicly

204 dorus vineacola and Paralongidorus litoralis were sequenced in this study.

205 However, in designing the panel of genes to be sequenced, investigators need to consider the tradeof

206 9.1/3.6 and 7.0/3.4 million tags were sequenced/mapped, then 1809 and 642 hnRNPK binding

207 uction of host IFNs, though the viral genome was sequenced more than 2 decades ago.

208 e target genome (exome, transcriptome, etc.) is sequenced multiple times.

209 divide the genome into fragments whose ends are sequenced on short-read sequencing platforms.

210 eam analysis pipelines while the samples are being sequenced on the MinION device.

211 p-frozen gastric corpus tissues and 16S rRNA was sequenced on GS-FLX Titanium.

212 The 16S RNA hypervariable region V4 was sequenced on Illumina MiSeq.

213 Clinical samples were sequenced on a massively parallel sequencing instru

214 turing performance, four exome-plus captures were sequenced on a NextSeq 500 with each capture contai

215 nd Sanger sequencing, and coding transcripts were sequenced on the cDNA level.

216 bling two Staphylococcus aureus strains that were sequenced on the Illumina platform.

217 rse primer sets, and fragmentation libraries were sequenced on the Ion Torrent Personal Genome Machin

218 d strains of the same species where only one is sequenced-potentially impairs exclusion of transmissi

219 reasing number and diversity of the proteins being sequenced presents new challenges to protein funct

220 region of ompA containing 13 tandem repeats was sequenced, revealing only seven shared SNPs (four no

221 he first shipworm symbiont to be cultivated, was sequenced, revealing potential as a rich source of p

222 RNA of laser-dissected ASM was sequenced (RNA-Seq) using GS FLX+ (454/Roche).

223 e arsenate respiratory reductase gene, arrA, was sequenced, showing high homology to the arrA gene of

224 Furthermore, because many more samples can be sequenced simultaneously, projects can be completed a

225 The genomes of nine ascidian species have been sequenced since the release of the C. intestinalis

226 As more genomes are sequenced, studying and classifying their asymmetrie

227 sed on analyzing bacteria whose genomes have been sequenced, such analyses are, however, complicated

228 As more diverse genomes are sequenced the emerging picture is of a highly subdiv

229 is high enough that even rare viral variants are sequenced, the presence of sequencing errors makes i

230 here only a few affected subjects per family are sequenced, the probability that any variant would be

231 Since the human genome was sequenced, the term "epigenetics" is increasingly be

232 owth in 7 samples that yielded amplimers and were sequenced, the NGS identified a number of bacterial

233 nvironmental and stool surveillance isolates were sequenced, their neurovirulence was determined usin

234 a, Goodyera fumata and Masdevallia picturata were sequenced; these genomes represent Vanilloideae, Cy

235 Analyses of metagenomic datasets that are sequenced to a depth of billions or trillions of bas

236 are available for comparison or when genomes are sequenced to low coverage.

237 d reference data are unavailable and genomes are sequenced to low coverage.

238 m in vivo cross-linked RNA-protein complexes are sequenced to reveal footprints of RNABP:RNA contacts

239 enomes of large numbers of single cells must be sequenced to further understanding of the biological

240 tion is whether similar sample sizes need to be sequenced to identify the FSVs.

241 EBV genomes isolated from NPC patients have been sequenced to date, and the role of EBV genomic vari

242 bed species, but no mitochondrial genome has been sequenced to date.

243 ough more than thirty mammalian genomes have been sequenced to draft quality, very few of these inclu

244 To date, the only Neandertal genome that has been sequenced to high quality is from an individual fou

245 ndreds of thousands of human genomes are now being sequenced to characterize genetic variation and us

246 ulting library is screened and the top clone is sequenced to determine the promoter controlling each

247 Plasma DNA obtained from a pregnant woman was sequenced to a depth of 270x haploid genome coverage

248 el of wild species, landraces, and cultivars was sequenced to assess genetic variation within tuber-b

249 cruited through 12 studies, and germline DNA was sequenced to identify mutations.

250 The maternal IgG3 gene was sequenced to identify the IgG3-H435 polymorphism.

251 The genome of Sphingobium sp. BiD32 was sequenced to provide a species-specific platform for

252 The samples were sequenced to a mean depth of 75x, yielding 101 sing

253 om four representative regions in China that were sequenced to an average 18.2 x coverage.

254 nes in 26 accessions of Arabidopsis thaliana were sequenced to assess intraspecific diversity, phylog

255 Several of these strains were sequenced to determine the genetic basis of the sup

256 of isolate pairs from coinfected individuals were sequenced to determine their molecular characterist

257 The isolates' genomes were sequenced to determine their relatedness, and their

258 Six nuclear genes were sequenced to estimate the patterns and levels of ge

259 Eighteen nuclear genes were sequenced to estimate the two species' phylogeograp

260 erase chain reaction (PCR); positive samples were sequenced to genotype the dhfr and dhps loci.

261 and whole genomes of 2 in vitro JH1 mutants were sequenced to identify mutations that may be associa

262 For each isolate, FKS1 and FKS2 genes were sequenced to identify mutations.

263 parated tumour samples from the same patient were sequenced to identify the regional distribution of

264 The full-length S and N genes were sequenced to study PDCoV genetic changes after pass

265 Although its genome has been sequenced, to date there is no report on targeted g

266 bisulfite-treated DNA from many individuals is sequenced together in a single pool, resulting in a t

267 ng the pncA coding region plus the promoter) was sequenced using Ion Torrent next-generation sequenci

268 The B. gladioli BCC0238 genome was sequenced using Single Molecule Real Time (SMRT) tec

269 regions V1-V3 and V3-V5 from these fractions were sequenced using 454.

270 Small RNA libraries were sequenced using a next-generation sequencing-based

271 sed into adapter-ligated cDNA libraries that were sequenced using an Illumina platform.

272 otype-specific primers and the same products were sequenced using both Sanger and 454 pyrosequencing

273 al loads (394 to 2,191,011 copies/ml plasma) were sequenced using multiplexing of up to 24 specimens

274 In total, 129 known human deafness genes were sequenced using next-generation sequencing (NGS) to

275 Transcripts from 20 embryos were sequenced using NGS technology, producing approxima

276 inhA, rpoB, gyrA, gyrB, rrs, eis, and tlyA) were sequenced using Sanger sequencing.

277 More than 500 diverse soybean accessions were sequenced using specific-locus amplified fragment s

278 phyla/subphyla of bacteria and archaea that were sequenced using standardized RNA-seq methods.

279 Isolated amplified messenger RNA samples were sequenced using the 454 pyrosequencing platform and

280 les of radish before and after fertilization were sequenced using the Digital Gene Expression (DGE) t

281 Here, 148 influenza A/H3N2 samples were sequenced using the HTS protocol and were compared

282 Barcoded fragment libraries were sequenced using the Illumina GAII or HiSeq and sequ

283 tracted, and partial 16S rRNA gene amplicons were sequenced using the Illumina platform.

284 The 40 OD4-CJ994 HSV-1 recombinants were sequenced using the Illumina sequencing system, and

285 er, 7 matched activated/nonactivated samples were sequenced using the Trugene HIV-1 genotyping kit.

286 om the solid support to the liquid phase, to be sequenced via single-step tandem mass spectrometry (M

287 opulations of different ancestry backgrounds are sequenced, we expect variant reclassifications to in

288 plets, allowing the full-length molecules to be sequenced with multi-fold coverage using short-read s

289 The chloroplast genome was sequenced with 161,528 bp in length, composed with o

290 er histories were collected and germline DNA was sequenced with NGS to identify mutations.

291 ected ASM from 96 bronchial biopsy specimens was sequenced with Roche GS FLX.

292 16S ribosomal RNA was sequenced with Roche GS-FLX (Genome Sequencer-FLX) p

293 The whole linked genomic region was sequenced with targeted high-throughput and Sanger s

294 lerosis patients and six healthy individuals were sequenced with ion-torrent and analyzed using DEseq

295 train containing two complex rearrangements, were sequenced with MinION.

296 om human fecal samples in Lothian, Scotland, were sequenced with the Ion Torrent Personal Genome Mach

297 and an African American case-control series were sequenced, with 1672 cases and 4509 European ancest

298 patients with a range of metastatic cancers were sequenced, with a mean coverage of 95X and 16 somat

299 ss-linked complementary DNA (cDNA) amplicons are sequenced within a biological sample.

300 ix atmospheric nitrogen, but no genomes have been sequenced yet to test the hypothesis.