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1 sis and shape mucosal immunity, similarly to commensal bacteria.
2 ber of microorganisms, generally regarded as commensal bacteria.
3 ch has the unwanted side effect of depleting commensal bacteria.
4  to the HIV Env gp41 and cross-reactive with commensal bacteria.
5 pathogen colonization by suppressing related commensal bacteria.
6  technology and probed their relationship to commensal bacteria.
7 tion were largely restored in the absence of commensal bacteria.
8 thological adaptive immune cell responses to commensal bacteria.
9 ntal factors, including signals derived from commensal bacteria.
10 alterations in the composition of intestinal commensal bacteria.
11 s under conditions allowed for the growth of commensal bacteria.
12 the continuous dialogue between the host and commensal bacteria.
13 ltaneously or individually in live anaerobic commensal bacteria.
14 ide (LPS) shed from Gram-negative intestinal commensal bacteria.
15 response against luminal antigens, including commensal bacteria.
16 epletes multiple immunologically significant commensal bacteria.
17 roup, which are ubiquitous and abundant oral commensal bacteria.
18 rom uncontrolled dissemination of intestinal commensal bacteria.
19 by Enterococcus faecalis, a human intestinal commensal bacteria.
20 wth of S. Typhimurium over that of competing commensal bacteria.
21 prevented by antibiotic treatment to deplete commensal bacteria.
22 he basis of the mucus adhesion properties of commensal bacteria.
23 preferential binding sites for pathogens and commensal bacteria.
24 nted filamentous bacteria, but also by other commensal bacteria.
25 e immune system are influenced by intestinal commensal bacteria.
26 tromal factor-driven macrophage tolerance to commensal bacteria.
27 ), which prevent inflammation in response to commensal bacteria.
28 ence the composition and function of enteric commensal bacteria.
29  systemic dysbiosis of aerobic and anaerobic commensal bacteria.
30  also partially eliminate naturally existing commensal bacteria.
31  which recognizes the products of intestinal commensal bacteria.
32 t likely by enabling pathogens to outcompete commensal bacteria.
33 s disease susceptibility in mice depleted of commensal bacteria.
34 se from mouse liver, including reactivity to commensal bacteria.
35 exposed continuously to dietary antigens and commensal bacteria.
36 eyer's patches and produced IgAs reactive to commensal bacteria.
37 ith broad-spectrum antibiotics which disrupt commensal bacteria.
38 ns pallens) also impairs the survival of gut commensal bacteria.
39 onstant dialog between the immune system and commensal bacteria.
40 uired for control of CD4 T-cell responses to commensal bacteria.
41 als to the host that have been attributed to commensal bacteria.
42 Relish response to both enteropathogenic and commensal bacteria.
43  intestine is densely populated by anaerobic commensal bacteria.
44                    Importantly, depletion of commensal bacteria abrogates TLR5-dependent differences
45 ucociliary clearance and overgrowth of nasal commensal bacteria accompanied by neutrophil exudation.
46 lic stress evokes significant penetration of commensal bacteria across the epithelium, which is media
47 he possible role of SIgA in the transport of commensal bacteria across the GI epithelium.
48                      To preserve this niche, commensal bacteria act with the host to prevent coloniza
49 rtantly, RNA species derived from intestinal commensal bacteria activate the RIG-I-MAVS pathway to in
50                      Our results clarify how commensal bacteria affect hepcidin expression and reveal
51 nt of cancer, but it remains unclear whether commensal bacteria affect inflammation in the sterile tu
52 , underpins competition among pathogenic and commensal bacteria alike.
53 t11 expression were observed in mice lacking commensal bacteria, an effect that was reversed by conve
54 ectrum, leading to indiscriminate killing of commensal bacteria and accelerated evolution of drug res
55 ion, these mechanisms preserve the niche for commensal bacteria and assist the host in preventing inf
56                                  Exposure to commensal bacteria and bacterial products induced NFIL3
57  that discriminates pathogenic bacteria from commensal bacteria and contributes to host defense in th
58  Interactions between potentially pathogenic commensal bacteria and cutaneous immunity are poorly und
59 l mucosa play a crucial role in tolerance to commensal bacteria and food antigens.
60 crobiome driven by low relative abundance of commensal bacteria and high relative abundance of potent
61 ar mechanisms that mediate symbiosis between commensal bacteria and humans may redefine how we view t
62 s reciprocal interactions between intestinal commensal bacteria and ILCs in the context of health and
63 enerically responsive to the presence of any commensal bacteria and innate in nature, as for IL-22-re
64 a pathogen and yet maintain tolerance toward commensal bacteria and innocuous dietary antigens.
65 ship that exists between the mammalian host, commensal bacteria and invasive pathogens can provide in
66 mmalian intestine is colonized by beneficial commensal bacteria and is a site of infection by pathoge
67 t contains a large and diverse population of commensal bacteria and is also one of the primary sites
68 lated adaptive immune cell responses against commensal bacteria and low-grade systemic inflammation.
69 plored role of MAVS in monitoring intestinal commensal bacteria and maintaining tissue homeostasis.
70 ely shape the symbiotic relationship between commensal bacteria and mammalian hosts.
71                        These IgAs react with commensal bacteria and oral antigens.
72 ent of the microbiome, and interactions with commensal bacteria and other microbial agents influence
73 e may promote ecological competition between commensal bacteria and pathogenic species.
74 malian cells, as well as mechanisms by which commensal bacteria and pathogens maintain immune privile
75 , Muc2(-/-) mice showed increased killing of commensal bacteria and prevented intestinal bacterial ov
76 ognized role for T cells in controlling skin commensal bacteria and provide a mechanism to account fo
77 ILCs resulted in peripheral dissemination of commensal bacteria and systemic inflammation, which was
78 tic signalling molecules may be common among commensal bacteria and that manipulation of microbiota g
79 that, after conditioning therapy, intestinal commensal bacteria and the damage-associated molecular p
80                 Regular interactions between commensal bacteria and the enteric mucosal immune enviro
81 se driven by dysbiosis, an imbalance between commensal bacteria and the host organism.
82                           In contrast, other commensal bacteria and their antigenic products, when pr
83                              An imbalance of commensal bacteria and their gene products underlies muc
84 s that govern the interactions between these commensal bacteria and their host remain poorly understo
85        Together, these data demonstrate that commensal bacteria and their products activate ROS signa
86                                              Commensal bacteria and their products provide beneficial
87 tem constitutively senses vast quantities of commensal bacteria and their products through pattern re
88  deficiency, demonstrating the importance of commensal bacteria and TNF in the IEC Ripk1 knockout phe
89                                              Commensal bacteria and/or their products engender benefi
90           Intestinal epithelial contact with commensal bacteria and/or their products has been shown
91  viral infection, a toxic insult to the gut, commensal bacteria, and a Crohn's disease susceptibility
92 ass Ib molecule MHC-related protein 1 (MR1), commensal bacteria, and a thymus.
93  inhibit colonization by specific subsets of commensal bacteria, and cooperatively maintain intestina
94 atory protein responses are dependent on the commensal bacteria, and more specifically, lipopolysacch
95 leum anti-gp41 antibodies cross-reacted with commensal bacteria, and of those, 43% showed non-HIV-1 a
96 with these VH4-34-encoded IgG clones binding commensal bacteria antigens.
97 ther than promote, inflammatory responses to commensal bacteria appears to be a central component of
98         Whether mutation and selection among commensal bacteria are associated with infection is unkn
99                                              Commensal bacteria are believed to have important roles
100                               Thus, although commensal bacteria are capable of driving chronic inflam
101 nt roles in digestion and harvesting energy, commensal bacteria are crucial for the proper functionin
102                                     Although commensal bacteria are crucial in maintaining immune hom
103 hat control proper anatomical containment of commensal bacteria are essential to maintain tissue home
104                        While the majority of commensal bacteria are found in the intestinal lumen, ma
105  glycolipid antigens derived from intestinal commensal bacteria are important hepatic NKT cell agonis
106                                              Commensal bacteria are known to have a significant role
107                                              Commensal bacteria are known to provide colonization res
108  the numerous gut microbial species, certain commensal bacteria are known to provide health benefits
109                                              Commensal bacteria are largely seen as harmless and can
110 een gastrointestinal parasitic helminths and commensal bacteria are likely to play a pivotal role in
111                                              Commensal bacteria are necessary for the development and
112  However it has recently become obvious that commensal bacteria are not simply beneficial bystanders,
113  investigate whether targeted pathogenic and commensal bacteria are related to risk of preterm birth
114 llin-hPepT1 transgenic mice, indicating that commensal bacteria are required to aggravate intestinal
115                 A major metabolic product of commensal bacteria are short-chain fatty acids (SCFAs) t
116  interest, such as lipid structures found in commensal bacteria, are emphasized.
117 xample of pathogen T6SS-dependent killing of commensal bacteria as a mechanism to successfully coloni
118 utes to both host-mediated recolonization by commensal bacteria as well as to defense against bacteri
119  key molecule for innate immune responses to commensal bacteria, as a target of miR-10a.
120              In this review, we propose that commensal bacteria associated with the mammalian GI trac
121 ial products (lipoteichoic acid) produced by commensal bacteria at the epithelial surface.
122            We have assembled a consortium of commensal bacteria belonging to the Clostridiales order,
123                  Here we investigate how two commensal bacteria, Bifidobacterium longum and Bacteroid
124                                 However, the commensal bacteria bound by IgA are poorly characterized
125 mmalian gut are not always relatively benign commensal bacteria but may also include larger and more
126 , maintaining homeostasis in the presence of commensal bacteria, but activating immune defenses in re
127  demonstrate exquisite targeting of distinct commensal bacteria by multiple layers of humoral immunit
128 ised and specific effector responses against commensal bacteria can develop.
129  conclude that serine proteases derived from commensal bacteria can directly impact the excitability
130                                 Signals from commensal bacteria can influence immune cell development
131         Therefore, bacteriocin expression by commensal bacteria can influence niche competition in th
132     Conversely, dysregulated localization of commensal bacteria can lead to inappropriate activation
133 rom host and environmental factors, and many commensal bacteria can produce multiple capsule types.
134                However, selective species of commensal bacteria can reside within intestinal lymphoid
135 w B. thetaiotaomicron, and other major human commensal bacteria, can metabolize and potentially tailo
136 tyrate, which is secreted in high amounts by commensal bacteria, can modulate the function of intesti
137                                              Commensal bacteria co-exist on the mucosal surfaces of a
138 ting that, as is widely found in amphibians, commensal bacteria confer protection against this pathog
139 trate that a precisely defined consortium of commensal bacteria containing the Clostridium cluster XI
140                 These findings indicate that commensal bacteria contribute to acute stress-induced in
141                                              Commensal bacteria contribute to immune homeostasis in t
142 y secretion systems, the mechanisms by which commensal bacteria deliver molecules to the host remain
143 ytokines interleukin-22 and lymphotoxin in a commensal bacteria-dependent and -independent manner, re
144 e RORgammat(+) ILCs resulted in dysregulated commensal bacteria-dependent CD4(+) T-cell responses tha
145  interactions and highlight the influence of commensal bacteria-derived H(2)O(2) on host physiology.
146 rients and metabolites and discuss how these commensal bacteria-derived products may regulate the dev
147 ular and molecular mechanisms that recognize commensal bacteria-derived signals and regulate mammalia
148                 In the context of infection, commensal bacteria-derived signals can influence the hos
149 t HDAC3 is a critical factor that integrates commensal-bacteria-derived signals to calibrate epitheli
150  Collectively, our data reveal a unique host-commensal-bacteria dialog whereby selective subsets of c
151 tabolites, presumably from pathogenic and/or commensal bacteria, distinguishes MAIT cells from peptid
152                                              Commensal bacteria downregulated dendritic cell miR-10a
153                We report that TLR5-dependent commensal bacteria drive malignant progression at extram
154 creen led to the identification of 26 unique commensal bacteria effector genes (Cbegs) that are predi
155 for the systematic identification of diverse commensal bacteria effectors that impact host cellular f
156 tigated whether oral administration of human commensal bacteria engineered to secrete GLP-1(1-37) cou
157 iza et al. (2016) uncover a new link between commensal bacteria, enteric glial cells, and ILC3s that
158                            Recently, enteric commensal bacteria Enterobacter cloacae has been recogni
159 d influenza A virus infection occurring upon commensal bacteria eradication is efficiently overturned
160                                              Commensal bacteria, especially segmented filamentous bac
161  to target these enzymes without killing the commensal bacteria essential for human health.
162        Our results indicate that coinfecting commensal bacteria exacerbate C. albicans infection thro
163 . albicans and nonfermentative gram-negative commensal bacteria exhibited increased fungal burden and
164                                   Therefore, commensal bacteria exploit the TLR pathway to actively s
165                                              Commensal bacteria express factors that support coloniza
166 dole, which is produced from l-tryptophan by commensal bacteria expressing tryptophanase, not only is
167 S and increased survival of oxygen-sensitive commensal bacteria (Faecalibacterium prausnitzii and Ros
168 for identifying potential mechanisms used by commensal bacteria for host interactions and outlines a
169                                              Commensal bacteria-free animals have thymocyte maturatio
170                                              Commensal bacteria from the skin and mucosal surfaces ar
171                               The ubiquitous commensal bacteria harbour genes of antimicrobial resist
172                  Although obligate anaerobic commensal bacteria have been associated with colonizatio
173 these nutrients and metabolites derived from commensal bacteria have been implicated in the developme
174  colonic immune homeostasis and tolerance to commensal bacteria have been intensively researched, the
175                                              Commensal bacteria have begun to receive much attention
176                             It is known that commensal bacteria have evolved a number of mechanisms t
177   Overall, TNFR2 blockade appears to disrupt commensal bacteria-host immune symbiosis to reveal autoi
178   These data support the role of H(2)O(2) in commensal bacteria-host interactions and highlight the i
179                                              Commensal bacteria impact host health and immunity throu
180                        The mechanisms of how commensal bacteria impact systemic immunity are unclear.
181                            Reintroduction of commensal bacteria in a murine model of enterococcal col
182 terial activity and that S Typhimurium kills commensal bacteria in a T6SS-dependent manner.
183 22 tipped the balance between pathogenic and commensal bacteria in favor of a pathogen.
184            Enterococcus faecalis strains are commensal bacteria in humans and other animals, and they
185 ibution of eosinophils to a response against commensal bacteria in IBD.
186 ne homeostasis of the intestine, the role of commensal bacteria in immune responses at other mucosal
187                        The importance of gut commensal bacteria in maintaining immune homeostasis is
188 tly labeled bacteria, we found that entry of commensal bacteria in Peyer's patches (PP) via the M cel
189 uggest a critical role for Cxcr2, Cxcl5, and commensal bacteria in regulation of the IL-17/G-CSF axis
190 e prenatal environment and early exposure to commensal bacteria in shaping the host immune system and
191                       The selectivity of the commensal bacteria in stress-evoked IL-1beta and IL-18 r
192 erji et al. now report a surprising role for commensal bacteria in the circadian regulation of glucoc
193 +/Sigirr-/- mice depended on the presence of commensal bacteria in the gastrointestinal tract.
194 ow HIV infection might change the balance of commensal bacteria in the gut.
195 lso affects the composition and diversity of commensal bacteria in the gut.
196 virus can replace the beneficial function of commensal bacteria in the intestine.
197 cquisition, composition, and localization of commensal bacteria in the intestine.
198 elative to the fast-paced research examining commensal bacteria in the intestine.
199 tary nitrate, serially reduced to nitrite by commensal bacteria in the oral cavity and subsequently t
200                             The high load of commensal bacteria in the small intestine may contribute
201 ensor appears to be conserved among numerous commensal bacteria, in contrast with numerous Gram-posit
202                                              Commensal bacteria, in particular, are key participants
203 ivo model to reveal protective mechanisms of commensal bacteria, including those relevant to mammalia
204                                              Commensal bacteria induce epithelial fucosylation, and e
205                                   Intestinal commensal bacteria induce protective and regulatory resp
206                        All tested strains of commensal bacteria induced ERK phosphorylation without s
207 with inhibitors of ROS generation attenuated commensal bacteria-induced ERK signaling, indicating tha
208                              The majority of commensal bacteria inhabit the gastrointestinal tract an
209 y, we expand on these findings and show that commensal bacteria initiate ERK signaling through rapid
210 bacteria dialog whereby selective subsets of commensal bacteria interact with dendritic cells to faci
211        We propose that binding of free SC to commensal bacteria is a key and conserved mechanism for
212 ommunication between pathogenic bacteria and commensal bacteria is a subject of growing interest.
213 ntigen (glycoantigen) PSA from an intestinal commensal bacteria is able to down-regulate inflammatory
214 lthy tissue, the neutrophil response to oral commensal bacteria is associated with the select express
215 and colleagues demonstrate that tolerance to commensal bacteria is established during the neonatal pe
216           Uncontrolled APC reactivity toward commensal bacteria is implicated in the pathogenesis of
217 tion between the mammalian immune system and commensal bacteria is necessary to limit chronic inflamm
218        Whereas the symbiotic contribution of commensal bacteria is well established, the role of euka
219                ROS generation induced by the commensal bacteria Lactobacillus rhamnosus GG and the FP
220 we demonstrate that lymphoid-tissue-resident commensal bacteria (LRC) colonized murine dendritic cell
221 nction of the immune system, suggesting that commensal bacteria may influence host immunity via nutri
222 ere found using the device developed between commensal bacteria (no infection) and bacteria inoculate
223 nflammation and disrupt the intestinal niche commensal bacteria occupy.
224                                              Commensal bacteria of low virulence are capable of produ
225 vars and other common respiratory pathogenic/commensal bacteria of pigs.
226                     It is suggested that the commensal bacteria of the digestive tract may play a rol
227                      Although the effects of commensal bacteria on intestinal immune development seem
228 eliminary study examined the contribution of commensal bacteria on neutrophil location across the too
229 the local antigens seemed to be derived from commensal bacteria, on the basis of the in vitro reactiv
230 t a commensal organism) and 143 (30.2%) grew commensal bacteria only.
231               Recolonization of GF mice with commensal bacteria or administration of lipopolysacchari
232 oteins are highly enriched in pathogenic and commensal bacteria, our work indicates that CRISPR/Cas-m
233 r function of the intestine and tolerance to commensal bacteria, overlaps a QTL on Chr 12 that influe
234                         Here, we report that commensal bacteria, particularly members of the genus La
235 udy investigates the interaction of tSC with commensal bacteria, pathogenic bacteria and a fungal pat
236                                              Commensal bacteria play an important role in formation o
237                                              Commensal bacteria protect against invading pathogens us
238                                Site-specific commensal bacteria provide key signals ensuring host def
239 inal selection whereby MHCII(+) ILC3 deletes commensal bacteria-reactive CD4 T cells.
240                   These results suggest that commensal bacteria regulate cell migration via induced g
241             However, the mechanisms by which commensal bacteria regulate protective immunity after ex
242  Here we review the current knowledge of how commensal bacteria regulate the production and bioavaila
243 ity and the mucosal immune system by sensing commensal bacteria, regulating microbial ecology, establ
244 ulation that orchestrates some of these host-commensal bacteria relationships that can impact immunit
245 al bacteria that result in dysregulated host-commensal bacteria relationships.
246                              The survival of commensal bacteria requires them to evade host peptidase
247  HuNoV replicates in human B cells, and that commensal bacteria serve as a cofactor for this infectio
248     It has been shown in the mouse that oral commensal bacteria significantly contribute to clinicall
249 these results define a selection pathway for commensal bacteria-specific CD4(+) T cells in the intest
250 ng T-cell proliferation, ILCs acted to limit commensal bacteria-specific CD4(+) T-cell responses.
251 ns, the mechanisms that control selection of commensal bacteria-specific T cells remain poorly unders
252 LC3s directly induce cell death of activated commensal bacteria-specific T cells.
253              We previously demonstrated that commensal bacteria stimulate ERK pathway activity via in
254           Here, we demonstrate that natural, commensal bacteria stimulate generation of reactive oxyg
255                                     Further, commensal bacteria stimulate the host's immune defenses
256 ng an inflammatory response in the gut, some commensal bacteria such as E. coli can thrive and contri
257 the concept that SIgA-mediated monitoring of commensal bacteria targeting dendritic cells in the sube
258 art by the relationship of the organism with commensal bacteria that affect inflammation with both lo
259 ract is colonized by trillions of beneficial commensal bacteria that are anatomically restricted to s
260 nzae (NTHi) are closely related upper airway commensal bacteria that are difficult to distinguish phe
261 ract is colonized by trillions of beneficial commensal bacteria that are essential for promoting norm
262 an intestine harbors trillions of beneficial commensal bacteria that are essential for the developmen
263                                              Commensal bacteria that colonize mammalian barrier surfa
264                            Staphylococci are commensal bacteria that colonize the epithelial surfaces
265 preinfection memory B cell pool triggered by commensal bacteria that cross-react with Env.
266 th our abilities to culture and sequence the commensal bacteria that dwell on and within a host, we c
267 nsal segmented filamentous bacteria or human commensal bacteria that induce intestinal TH17 cells wer
268                                              Commensal bacteria that interact with a eukaryotic host
269 enzymes occur in a variety of pathogenic and commensal bacteria that interact with eukaryotic hosts.
270                        However, the specific commensal bacteria that promote host resistance and immu
271 017) define a precise, limited consortium of commensal bacteria that restores resistance to colonizat
272 ations in the composition or localization of commensal bacteria that result in dysregulated host-comm
273 orption of the alveolar bone and mediated by commensal bacteria that trigger host immune responses an
274 lamina propria macrophages hyporesponsive to commensal bacteria through the down-regulation of proinf
275 ens have evolved mechanisms that can utilize commensal bacteria to establish a replicative advantage
276  with impaired epithelial integrity, enables commensal bacteria to function as highly pathogenic orga
277 s, it is mutually beneficial to the host and commensal bacteria to inhibit a pathogen's ability to es
278 age populations, preventing translocation of commensal bacteria to mesenteric lymph nodes (mLNs), and
279 ng VRE, administration of obligate anaerobic commensal bacteria to mice results in a billionfold redu
280 isplayed markedly increased translocation of commensal bacteria to mLNs.
281 macromolecules are critical for adherence of commensal bacteria to mucus but structural information i
282 cellular and molecular pathways activated by commensal bacteria to protect against allergic sensitiza
283 l-host interaction, including the ability of commensal bacteria to remain immunologically silent and
284 lecule and illustrates the lifelong value of commensal bacteria to their host.
285  studies revealed that IL17A synergized with commensal bacteria to trigger Ikkepsilon phosphorylation
286 rant of foreign antigens, such as those from commensal bacteria, to prevent immunopathology such as i
287 lammatory CD4(+) T cell responses to self or commensal bacteria underlie the pathogenesis of autoimmu
288 e is known about the specific effectors that commensal bacteria use to interact with the human host.
289       We present evidence that both reducing commensal bacteria using antibiotics and neutralizing LP
290 s infectivity without affecting host cell or commensal bacteria viability.
291  between proinflammatory cytokine levels and commensal bacteria was observed in smokers but not in no
292 n gut microbiota composed of fully sequenced commensal bacteria, we elucidated the functional interac
293                                              Commensal bacteria were characterized in uninfected GC-C
294 population specialized in the containment of commensal bacteria when gut barriers are breached.
295  the cytokine production of PBMCs induced by commensal bacteria when these cells were primed by C. al
296  in the number and composition of intestinal commensal bacteria, which leads to susceptibility to opp
297   Overall, our data suggest that defined gut commensal bacteria with a propensity to induce TH17 cell
298  are now a handful of examples of intestinal commensal bacteria with defined immunomodulatory propert
299 iota, the presence of individual mutualistic commensal bacteria with immunomodulatory effects has bee
300 urrent study is to compare the prevalence of commensal bacteria, with beneficial properties, for heal

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